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Species belonging to selected taxon:

Cryptomeria japonica, Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii



ABOUT THIS RECORD

ID: MNEST044824
species: Picea glauca
source: microPC, original name: miR396

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTCCACGGCTTTCTTGAACT

miRNA*
 CTCAAGAAAGCCGTGGGA

mismatches: 1
bulges: 0
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pre-miRNA
 TTCCACGGCTTTCTTGAACTTCCCGATCGGGAGTGTTGGCGACAGATCGCACCGCTAACAGATCCGCATACGAAGCTCAAGAAAGCCGTGGGA

dot-bracket secondary structure
(((((((((((((((((.((((...((((((..((((((((...........))))))))..)))).))..)))).)))))))))))))))))


SIMILARITIES
miRBase pab-MIR396c: 7e-48

PMRD ptc-miRf11071-akr: 0.00002

microPC miR396: 7e-48		UniProt no hits

RFAM MIR396: 0.0003

Identical with: pab-MIR396c from miRBase (MNEST039381)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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