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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Manihot esculenta, Ricinus communis



ABOUT THIS RECORD

ID: MNEST044846
species: Manihot esculenta
source: microPC, original name: miR399

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCCAAAGGAGATTTGCC

miRNA*
 CAAAACCTCCATTGGCATG

mismatches: 2
bulges: 1
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pre-miRNA
 GGCAAAACCTCCATTGGCATGCAGCCACACTAAGATTCTCTATCCTTGTTGTGCATTCCTATAGTGTGCTCCATGCCAAAGGAGATTTGCC

dot-bracket secondary structure
((((((..((((.((((((((.(((.((((((.(((.....)))..((.....))......))))))))).)))))))).)))).))))))


SIMILARITIES
miRBase rco-MIR399c: 0.00000002

PMRD ptc-miRf10808-akr: 0.00007

microPC miR399: 1e-46		UniProt no hits

RFAM mir-399: 0.0000003

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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