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Species belonging to selected taxon:

Glycine soja, Glycine max



ABOUT THIS RECORD

ID: MNEST044861
species: Glycine max
miRNA family: MIR408
source: microPC, original name: miR408

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCACTGCCTCTTCCCTGGCT

miRNA*
 CTGGGAACAGGCAGGGCACG

mismatches: 2
bulges: 1
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pre-miRNA
 GGCTGGGAACAGGCAGGGCACGAATGGAGCTATCAACAGAAAATGGTAAAGTGAGAATGAAAGGAGAGAGAGAGAGAGAGATCTGTTGTGGCTACGCTCA
TGCACTGCCTCTTCCCTGGCT

dot-bracket secondary structure
(((((((((.((((((.(((.((.((.(((((.(((((((.........................................)))))))))))).)).)).
))).)))))).))))).))))


SIMILARITIES
miRBase ahy-MIR408: 0.000000006

PMRD gma-miR408a: 3e-29

microPC miR408: 5e-31		UniProt no hits

RFAM MIR408: 6e-31

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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