miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Agrostis stolonifera, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum

ABOUT THIS RECORD

ID: MNEST044862
species: Triticum aestivum
miRNA family: MIR1439
source: microPC, original name: miR1439

Taxonomy by NCBI:
Triticum aestivum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTTTGGAACGGAGGGAGTAT

miRNA*
ACTCCCTCTGTTTCAAAATA

mismatches: 1
bulges: 0

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pre-miRNA
TACTCCCTCTGTTTCAAAATAGATGACCCAACTTTGTACTACCTCCATTTACAAAGTTGAGTCACCTATTTTGGAACGGAGGGAGTAT

dot-bracket secondary structure
((((((((((((((((((((((.((((.((((((((((...........)))))))))).)))).)))))))))))))))))))))).

UniProt no hits

RFAM MIR1122: 0.00000000000002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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