ABOUT THIS RECORDspecies: Salvia miltiorrhiza
source: microPC, original name: miR156
Taxonomy by NCBI:
Salvia miltiorrhiza Salvia Mentheae Nepetoideae Lamiaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGATAGAGAGCAC miRNA* ACTCTCTATACTTCTG mismatches: 1 bulges: 1 |
pre-miRNA
CAGAAGATAGAGAGCACCAACGATGAAGTTGCAAACTTTGCATCTCACTCCTTTGTACTCTCTATACTTCTG
dot-bracket secondary structure
((((((((((((((.((.((.(((((.(.((((.....)))).)))).)).)).)).)))))))).))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGAAGATAGAGAGCACCAACGATGAAGTTGCAAACTTTGCATCTCACTCCTTTGTACTCTCTATACTTCTG
dot-bracket secondary structure
((((((((((((((.((.((.(((((.(.((((.....)))).)))).)).)).)).)))))))).))))))
SIMILARITIES| miRBase vvi-MIR156g: 0.000000003 PMRD vvi-miR156g: 0.000000003 microPC miR157: 2e-35 | UniProt no hits RFAM no hits |
Identical with: miR157 from microPC (MNEST045887) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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