miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Zea mays, Sorghum bicolor

ABOUT THIS RECORD

ID: MNEST044942
species: Sorghum bicolor
miRNA family: MIR528
source: microPC, original name: miR528

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGGAAGGGGCATGCAGAGGAG

miRNA*
CCTGTGCCTGCCTCTTCCA

mismatches: 3
bulges: 0

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pre-miRNA
TGGAAGGGGCATGCAGAGGAGCACGAGGGTTGGCTGGAAGCCGACCTACGCCTCGCTGGCTCTCCTGTGCCTGCCTCTTCCA

dot-bracket secondary structure
.((((((((((.(((.(((((.....((((((((.....))))))))..(((.....))).))))).))).)))))))))).

UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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