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Species belonging to selected taxon:

Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST044953
species: Sorghum bicolor
miRNA family: MIR169
source: microPC, original name: miR169

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAAGGATGACTTGCCTA

miRNA*
 GGCAGTCTCCTTGGCTA

mismatches: 0
bulges: 2
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pre-miRNA
 TAGCCAAGGATGACTTGCCTATATCCTCTCTAAAGGATCAGCAAATATTGAGGCTTCTAGTGGTCTCATATGGGCAGTCTCCTTGGCTA

dot-bracket secondary structure
((((((((((.((((.(((((((((((......))))...........(((((((......))))))))))))))))))))))))))))


SIMILARITIES
miRBase sbi-MIR169m: 2e-45

PMRD sbi-miR169m: 2e-45

microPC miR169: 3e-44		UniProt no hits

RFAM MIR169_5: 3e-44

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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