ABOUT THIS RECORDspecies: Paullinia cupana var. sorbilis
source: microPC, original name: miR1448
Taxonomy by NCBI:
Paullinia cupana var. sorbilis Paullinia cupana Paullinia Sapindaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTTCCAACACCTCTCATAC miRNA* ATGAGAGGACTGGACAGAG mismatches: 3 bulges: 1 |
pre-miRNA
GTATGAGAGGACTGGACAGAGCTGAGCTTGTAGCTTTTTCTTTTGAATTCTTTCCAACACCTCTCATAC
dot-bracket secondary structure
((((((((((..((((.(((...((((.....)))).(((....))).))).))))...))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GTATGAGAGGACTGGACAGAGCTGAGCTTGTAGCTTTTTCTTTTGAATTCTTTCCAACACCTCTCATAC
dot-bracket secondary structure
((((((((((..((((.(((...((((.....)))).(((....))).))).))))...))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
