miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Paullinia cupana var. sorbilis, Citrus clementina

ABOUT THIS RECORD

ID: MNEST044963
species: Paullinia cupana var. sorbilis
source: microPC, original name: miR1448

Taxonomy by NCBI:
Paullinia cupana var. sorbilis Paullinia cupana Paullinia Sapindaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
CTTTCCAACACCTCTCATAC

miRNA*
ATGAGAGGACTGGACAGAG

mismatches: 3
bulges: 1

View larger

pre-miRNA
GTATGAGAGGACTGGACAGAGCTGAGCTTGTAGCTTTTTCTTTTGAATTCTTTCCAACACCTCTCATAC

dot-bracket secondary structure
((((((((((..((((.(((...((((.....)))).(((....))).))).))))...))))))))))

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record