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Species belonging to selected taxon:

Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST044994
species: Sorghum bicolor
miRNA family: MIR169
source: microPC, original name: miR169

Taxonomy by NCBI:
Sorghum bicolor Sorghum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAAGGATGACTTGCCTG

miRNA*
 GGCAGTCTCCTTGGCTA

mismatches: 0
bulges: 2
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pre-miRNA
 TAGCCAAGGATGACTTGCCTGTGGCCTCCACTCCACCTGCGGCAGGAGGCTCTTCTTCTGCGCGCGCGTGTGTGTGTGGTTGTCGATCGCAGGCAGTCTC
CTTGGCTA

dot-bracket secondary structure
((((((((((.((((.(((((((..(.((((.(((((((((((((((((....)))))))).)))).).))).).)))).....)..)))))))))))))
))))))))


SIMILARITIES
miRBase sbi-MIR169f: 1e-56

PMRD sbi-miR169f: 1e-56

microPC miR169: 1e-56		UniProt no hits

RFAM MIR169_5: 2e-55

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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