miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST044998
species: Glycine max
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCCC

miRNA*
 GGAATGTTGGCTGGCTCGAGG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 GGGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
((((((((..(.((((..(((((((((..........((((((........))))))..)))))))))..)))).)..))))))))


SIMILARITIES
miRBase mtr-MIR166e: 0.000000000001

PMRD gma-miR166o: 1e-43

microPC miR166: 1e-43		UniProt no hits

RFAM mir-166: 0.000000000001

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence




Liczniki na strone;