ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR166
source: microPC, original name: miR166
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCCC miRNA* GGAATGTTGGCTGGCTCGAGG mismatches: 5 bulges: 0 |
pre-miRNA
GGGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCC
dot-bracket secondary structure
((((((((..(.((((..(((((((((..........((((((........))))))..)))))))))..)))).)..))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
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deep sequencing data evidence
GGGGAATGTTGGCTGGCTCGAGGCTTTTCAAAGAGGAGGTTCTCACTGGCAAGAACTATAAGGCTTCGGACCAGGCTTCATTCCCC
dot-bracket secondary structure
((((((((..(.((((..(((((((((..........((((((........))))))..)))))))))..)))).)..))))))))
SIMILARITIES| miRBase mtr-MIR166e: 0.000000000001 PMRD gma-miR166o: 1e-43 microPC miR166: 1e-43 | UniProt no hits RFAM mir-166: 0.000000000001 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence
