miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris

ABOUT THIS RECORD

ID: MNEST045034
species: Medicago truncatula
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCGGACCAGGCTTCATTCCCC

miRNA*
GGAATGTTGTCTGGCTCGAGG

mismatches: 4
bulges: 0

View larger

pre-miRNA
GGGGAATGTTGTCTGGCTCGAGGACGCTTTCTTCTCGATCTAATGCAAATTTGTGGTCATGGATTGTAAAGTATTCTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
((((((((..((((((..((((((..((((.....(((((((.((((....))))....))))))).))))..))))))..))))))..))))))))

UniProt no hits

RFAM mir-166: 6e-49

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record