ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR166
source: microPC, original name: miR166
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCCC miRNA* GGAATGTTGTCTGGCTCGAGG mismatches: 4 bulges: 0 |
pre-miRNA
GGGGAATGTTGTCTGGCTCGAGGACGCTTTCTTCTCGATCTAATGCAAATTTGTGGTCATGGATTGTAAAGTATTCTCGGACCAGGCTTCATTCCCC
dot-bracket secondary structure
((((((((..((((((..((((((..((((.....(((((((.((((....))))....))))))).))))..))))))..))))))..))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGGGAATGTTGTCTGGCTCGAGGACGCTTTCTTCTCGATCTAATGCAAATTTGTGGTCATGGATTGTAAAGTATTCTCGGACCAGGCTTCATTCCCC
dot-bracket secondary structure
((((((((..((((((..((((((..((((.....(((((((.((((....))))....))))))).))))..))))))..))))))..))))))))
SIMILARITIES| miRBase mtr-MIR166g: 3e-50 PMRD mtr-miR166d: 8e-48 microPC miR166: 3e-50 | UniProt no hits RFAM mir-166: 6e-49 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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