miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST045036
species: Arachis hypogaea
source: microPC, original name: miR319

Taxonomy by NCBI:
Arachis hypogaea Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC

miRNA*
GCTCCTTGAAGTCCAACAG

mismatches: 3
bulges: 0

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pre-miRNA
GAGCTCCTTGAAGTCCAACAGAGGGTCTTGGTGGGTGGATTGAGCTGCTAAGCTATGGATCCCACAGTACTACCCATATATACCCCATTATGCAGTGGTA
GTTCTGCGGATTCCATATCCTGGGAGCTTCATTACCTTTCCACAGATCCTTATTTGGATTGAAGGGAGCTC


dot-bracket secondary structure
(((((((((..(((((((..(((((((((((.(((((.((.(((((.(((.(.((((((..((.(((.(((((((.((((........))))..).))))
)).))).))..)))))).).))).))))).)))))))..))).))))))))..)))))))..)))))))))



SIMILARITIES
miRBase ahy-MIR159: 1e-91

PMRD pvu-miR159: 3e-21

microPC miR159: 4e-94
UniProt no hits

RFAM MIR159: 7e-19

Identical with: miR159 from microPC (MNEST045397)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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