ABOUT THIS RECORDspecies: Pinus taeda
miRNA family: MIR950
source: microPC, original name: miR950
Taxonomy by NCBI:
Pinus taeda Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGGTCCTCGGTGGTTTAT miRNA* AAACCATCGTGGAGCCGA mismatches: 4 bulges: 1 |
pre-miRNA
TCAGGTCCTCGGTGGTTTATTGCTCATCGTTTGTTTATAATAAACCATCGTGGAGCCGA
dot-bracket secondary structure
...(((((.(((((((((((((..((.....))....))))))))))))).))).))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TCAGGTCCTCGGTGGTTTATTGCTCATCGTTTGTTTATAATAAACCATCGTGGAGCCGA
dot-bracket secondary structure
...(((((.(((((((((((((..((.....))....))))))))))))).))).))..
SIMILARITIES| miRBase pta-MIR950a: 8e-28 PMRD pta-miR950a: 8e-28 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
