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Species belonging to selected taxon:

Citrus aurantium, Citrus reticulata, Citrus sinensis, Citrus unshiu, Citrus clementina



ABOUT THIS RECORD

ID: MNEST000451
species: Citrus unshiu
miRNA family: MIRf1017
source: miRNEST

Taxonomy by NCBI:
Citrus unshiu Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATTTTTCTGCATTTGCACCTG

miRNA*
 GCTGTATATGCAGGTGAATGC

mismatches: 4
bulges: 0
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pre-miRNA
 GGCACGAGATTTTTCTGCATTTGCACCTGCACCTTGCTGTGCTGTTATCTGGGTTGACGAAGATCATCATGATGATCAGCTTCAAAACTCGAAAGCATGA
AGGTGCAGCTGTATATGCAGGTGAATGCCATTT

dot-bracket secondary structure
((((.....(((.(((((((.((((.(((((((((..((((((......((((((...((((...((((...))))...))))..))))))..)))))))
)))))))).)))).))))))).)))))))....


SIMILARITIES
miRBase csi-MIR530a: 4e-69

PMRD ptc-miRf11026-akr: 0.00003

microPC miR1030: 0.00003		UniProt no hits

RFAM MIR530: 0.0001		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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