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Species belonging to selected taxon:

Ipomoea batatas, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST045107
species: Ipomoea nil
miRNA family: MIR169
source: microPC, original name: miR169

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCCAAGGATGACTTGCCGG

miRNA*
 GGCGAGTTGTCCTTGGCT

mismatches: 2
bulges: 0
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pre-miRNA
 AGCCAAGGATGACTTGCCGGCCGGTGAACTCTTCCTCCTATTGCGGCGGACCCAACCATATATCCACCGCTCCGTACACTCTCAGGGTGACGAAAAGTTT
GTAAGTTGGCGAGTTGTCCTTGGCT

dot-bracket secondary structure
(((((((((..((((((((((..(..((((............((((.(((............))).))))..(((.((((.....)))))))...)))).
.)..))))))))))..)))))))))


SIMILARITIES
miRBase osa-MIR169p: 0.000002

PMRD osa-miRf11416-akr: 0.000002

microPC miR169: 8e-67		UniProt no hits

RFAM MIR169_2: 0.00003

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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