miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum

ABOUT THIS RECORD

ID: MNEST045267
species: Solanum lycopersicum
source: microPC, original name: miR167

Taxonomy by NCBI:
Solanum lycopersicum Lycopersicon Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AAGCTGCCAGCATGATCT

miRNA*
ATCATGTGGTTGCTT

mismatches: 1
bulges: 1

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pre-miRNA
AAGCTGCCAGCATGATCTAAACTTACCTATAAATTTATATTAAGGCAAGATCAGATCATGTGGTTGCTT

dot-bracket secondary structure
((((.((((.((((((((...(((.(((.(((.......)))))).)))...)))))))))))).))))

UniProt no hits

RFAM MIR167_1: 0.00001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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