miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST045269
species: Glycine max
miRNA family: MIR167
source: microPC, original name: miR167

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTA

miRNA*
GGTCATGCTGTAACAGCCTCA

mismatches: 3
bulges: 2

View larger
pre-miRNA
TGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGCTGAAGAAGAGTGTTAAATGCTAACCCTTACTAGGTCATGCTGTAACAGCCTCA

dot-bracket secondary structure
.((.((((.(((((((((((((....((((((..(((...........))).....))))))....)))))))))))))...)))).)).


SIMILARITIES
miRBase gma-MIR167a: 0.0000000000003

PMRD gma-miR167a: 0.0000000000003

microPC miR167: 1e-43
UniProt no hits

RFAM MIR167_1: 0.000000000005

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence





Liczniki na strone;