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Species belonging to selected taxon:
Medicago sativa
,
Medicago truncatula
ABOUT THIS RECORD
ID:
MNEST045302
species:
Medicago truncatula
miRNA family:
MIR166
source:
microPC, original name:
miR166
Taxonomy by NCBI:
Medicago truncatula
Medicago
Trifolieae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCC
miRNA*
AATGTTGGCTGGCTCGAGG
mismatches:
5
bulges:
0
View larger
pre-miRNA
GG
AATGTTGGCTGGCTCGAGG
CTTTTCAGTTTCACAAAGGAAGTTCAGTCTTAATTGTATGAACTATAAGGCT
TCGGACCAGGCTTCATTCC
dot-bracket secondary structure
((
((((..(.((((..(((((
((((..(((((.((((...(((......)))..))))..)))))..))))))
)))..)))).)..))))))
SIMILARITIES
miRBase
mtr-MIR166e
:
3e-47
PMRD
mtr-miR166b
:
3e-47
microPC
miR166
:
3e-47
UniProt
no hits
RFAM
mir-166: 5e-46
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
degradome data
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