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Species belonging to selected taxon:

Liriodendron tulipifera



ABOUT THIS RECORD

ID: MNEST045309
species: Liriodendron tulipifera
source: microPC, original name: miR319

Taxonomy by NCBI:
Liriodendron tulipifera Liriodendron Magnoliaceae Magnoliales magnoliids Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGGACTGAAGGGAGCTCCC

miRNA*
 GAGCTCTCTTCAGTCCAGTC

mismatches: 1
bulges: 0
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pre-miRNA
 GGAGCTCTCTTCAGTCCAGTCCAAGATAGTATTAAGCCAATCTCCGCTGCTGACTCGTTGGCTCATGAACTCATCCAACGGCTAGGATTCCGATGTGTTT
TTGATCCAACGATGCGGGAGCCGTGTTTGGTTCTGTCTGTCTCGTCTTGGACTGAAGGGAGCTCCC

dot-bracket secondary structure
(((((((((((((((((((..(.((((((.((..((((((.(.(.(((.(((..(((((((.(((.((((.((((....((........)))))).))))
.))).)))))))..))).))).).).))))))..)))))))).)..))))))))))))))))))).


SIMILARITIES
miRBase vvi-MIR319b: 0.00000000000004

PMRD ltu-miR319: 4e-91

microPC miR319: 2e-90		UniProt no hits

RFAM MIR159: 0.0000000000007

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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