miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris

ABOUT THIS RECORD

ID: MNEST045389
species: Phaseolus coccineus
source: microPC, original name: miR167

Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AAGCTGCCAGCATGATCTT

miRNA*
GATCATGTGGCAGTTT

mismatches: 1
bulges: 1

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pre-miRNA
AAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTT

dot-bracket secondary structure
(((((((((.((((((((...((..(((((......)))))..))...)))))))))))))))))

UniProt no hits

RFAM MIR167_1: 0.0000000000002

Identical with: pco-miR167 from PMRD (MNEST051324)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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