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Species belonging to selected taxon:
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Citrus clementina
ABOUT THIS RECORD
ID:
MNEST045425
species:
Citrus clementina
miRNA family:
MIR168
source:
microPC, original name:
miR168
Taxonomy by NCBI:
Citrus clementina
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAA
miRNA*
CCCGCCTTGCATCAACTGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TCGCTTGGTGCAGGTCGGGAA
CTGATTGGCTAGTTTTTTTTTGAAATTTTTTGACAGCGAGGTGGCGTGTTGTAATTGGTCGTCACGTTTAAATTAATGA
TTGAAAAAAATGCGAATTGGAT
CCCGCCTTGCATCAACTGA
dot-bracket secondary structure
(((.((((((((((.(((((.
(..(((.((....(((((((..(.(((..((...((((.(..(((............)))..).))))..))..)))..
)..))))))).)).)))..).)
)))).)))))))))).)))
SIMILARITIES
miRBase
crt-MIR168
:
1e-32
PMRD
rco-miR168
:
0.0000000001
microPC
miR168
:
1e-32
UniProt
no hits
RFAM
MIR168: 0.0000000005
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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