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Species belonging to selected taxon:

Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Populus trichocarpa, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST045435
species: Populus trichocarpa
miRNA family: MIR482
source: microPC, original name: miR482

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCTTGCCTACTCCTCCCATT

miRNA*
 TGGGAGAGTATGCAAGAAG

mismatches: 1
bulges: 1
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pre-miRNA
 AGATGGGAGAGTATGCAAGAAGGAAAAATTCATGATTTAATATCTCTTCTTGCCTACTCCTCCCATT

dot-bracket secondary structure
.((((((((((((.((((((((((.(((((...)))))....)).)))))))).)))).))))))))


SIMILARITIES
miRBase ptc-MIR482: 2e-25

PMRD no hits

microPC miR482: 2e-32		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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