ABOUT THIS RECORDspecies: Juglans hindsii x Juglans regia
source: microPC, original name: miR482
Taxonomy by NCBI:
Juglans hindsii x Juglans regia Juglans Juglandaceae Fagales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCTACTCCTCCCATTCC miRNA* AATGGGAAGATAGGAA mismatches: 1 bulges: 1 |
pre-miRNA
GGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCC
dot-bracket secondary structure
(((((((((.(((((((((((((.((((((((......)))))))).))..........))))))))).)).)))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGAATGGGAAGATAGGAAAGAACCAAGGTGTTGTCAGAAACATCTTTGTTTTCTTTCCTTCTTTCCTACTCCTCCCATTCC
dot-bracket secondary structure
(((((((((.(((((((((((((.((((((((......)))))))).))..........))))))))).)).)))))))))
SIMILARITIES| miRBase vvi-MIR482: 0.00001 PMRD vvi-miR482: 0.00001 microPC miR482: 9e-41 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
