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Species belonging to selected taxon:
Linum usitatissimum
ABOUT THIS RECORD
ID:
MNEST045613
species:
Linum usitatissimum
source:
microPC, original name:
miR1533
Taxonomy by NCBI:
Linum usitatissimum
Linum
Linaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATAATAATAATAATAAT
miRNA*
TAAATTATGTGTTGTTGT
mismatches:
2
bulges:
1
View larger
pre-miRNA
ATAATAATAATAATAAT
ACTAATAAATTATGCGTTGTGGTTGAATTAATAATAATAATAGTAGTAATAGTAA
TAAATTATGTGTTGTTGT
dot-bracket secondary structure
((((((((((((((..(
((((.((.(((((..(((((.((((...)))).))))).)))))..)).))))).
...))))).)))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
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