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Species belonging to selected taxon:

Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa



ABOUT THIS RECORD

ID: MNEST045657
species: Lactuca virosa
source: microPC, original name: miR171

Taxonomy by NCBI:
Lactuca virosa Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAGCCGTGCCAATATCATG

miRNA*
 TGATGTTGGAATGGCTCAATC

mismatches: 2
bulges: 0
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pre-miRNA
 ATGATGTTGGAATGGCTCAATCAAATCAGATCTCCCCGGATGAATCAACAGGGTGTTTTAGTTTGATTGAGCCGTGCCAATATCATG

dot-bracket secondary structure
((((((((((.(((((((((((((((.(((.(.(((.(..........).))).).))).))))))))))))))).)))))))))).


SIMILARITIES
miRBase tcc-MIR171f: 0.00000000007

PMRD vvi-miR171i: 0.0000000003

microPC miR171: 1e-43		UniProt no hits

RFAM MIR171_1: 0.000000005

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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