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Species belonging to selected taxon:

Prunus armeniaca, Prunus persica



ABOUT THIS RECORD

ID: MNEST045658
species: Prunus persica
source: microPC, original name: miR171

Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGAGCCGTGCCAATATCA

miRNA*
 ATGTTGGCGTGGCTCAATC

mismatches: 1
bulges: 0
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pre-miRNA
 TGATGTTGGCGTGGCTCAATCAAATCAAACTTCTCAACTGTTTATTGGGTCCTTTAATTTGATTGAGCCGTGCCAATATCA

dot-bracket secondary structure
.((((((((((((((((((((((((.(((...(((((.......)))))...))).)))))))))))))))))))))))).


SIMILARITIES
miRBase vvi-MIR171i: 0.00000000000002

PMRD ppe-miR171: 9e-41

microPC miR171: 9e-41		UniProt no hits

RFAM MIR171_1: 0.0000000000003

Identical with: ppe-miR170 from PMRD (MNEST051345)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
degradome data
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