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Species belonging to selected taxon:

Oryza sativa



ABOUT THIS RECORD

ID: MNEST045707
species: Oryza sativa
source: microPC, original name: miR809

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAATGTGAGAAATGCTAGAAT

miRNA*
 TTTAGTATTTCCCACATTCATA

mismatches: 1
bulges: 0
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pre-miRNA
 ATTTTAGTATTTCCCACATTCATATTGATGCTGATGATCTAGATAGATATATATGTCTATATTCATTACCATCAATATGAATGTGAGAAATGCTAGAAT

dot-bracket secondary structure
(((((((((((((.((((((((((((((((.((((((..((((((........))))))...)))))).)))))))))))))))).)))))))))))))


SIMILARITIES
miRBase osa-MIR809g: 1e-25

PMRD osa-miR809g: 1e-25

microPC miR809: 2e-51		UniProt no hits

RFAM MIR1122: 7e-27

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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