miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Barnadesia spinosa, Cichorium intybus, Gerbera hybrid cultivar, Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Lactuca perennis, Lactuca saligna, Lactuca sativa, Lactuca serriola, Lactuca virosa, Panax ginseng, Parthenium argentatum, Taraxacum kok-saghyz, Taraxacum officinale, Zinnia violacea, Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis, Cichorium endivia, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST045810
species: Centaurea solstitialis
source: microPC, original name: miR156

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCA

miRNA*
 CCCACTTCTCTTGCTGTCA

mismatches: 2
bulges: 2
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pre-miRNA
 TGACAGAAGAGAGTGAGCATATGCAAAGCAATTGTATAGAAAAACTATACATTTGTTGGAATTATGCGTGTGCCCACTTCTCTTGCTGTCA

dot-bracket secondary structure
.((((((((((((((.(((((((((.(((((.(((((((.....))))))).))))).......))))))))).))).)))))).))))).


SIMILARITIES
miRBase osa-MIR156l: 0.00007

PMRD vvi-miR156d: 0.00007

microPC miR156: 2e-45		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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