miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis, Pinus banksiana, Pinus contorta, Pinus pinaster, Pinus taeda, Pseudotsuga menziesii var. menziesii

ABOUT THIS RECORD

ID: MNEST045813
species: Pinus taeda
miRNA family: MIR1314
source: microPC, original name: miR1314

Taxonomy by NCBI:
Pinus taeda Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCGGCCTTGAATGTTAGGAGAA

miRNA*
CTTCAACATTAGAGGCCAATA

mismatches: 4
bulges: 1

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pre-miRNA
TTCTTCAACATTAGAGGCCAATATAGAATAATATTCTTATTCTTAATCGGCCTTGAATGTTAGGAGAA

dot-bracket secondary structure
.(((((((((((.((((((.....(((((((.....))))))).....)))))).)))))).))))).

UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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