ABOUT THIS RECORDspecies: Eragrostis curvula
source: microPC, original name: miR169
Taxonomy by NCBI:
Eragrostis curvula Eragrostis Eragrostidinae Eragrostideae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAGCCAATGATGACTTGCCT miRNA* GCAGTCCCCTTGGCTAG mismatches: 2 bulges: 2 |
pre-miRNA
TAGCCAATGATGACTTGCCTGTGTCGACCTCCGCGAAGGATCATCGTATCATCCAACGATGAGCCTTCATGTGGTCTCATGGGCAGTCCCCTTGGCTAG
dot-bracket secondary structure
(((((((.(..((((.(((((((..((((..((.(((((.(((((((........))))))).))))).)).)))).)))))))))))..)))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
TAGCCAATGATGACTTGCCTGTGTCGACCTCCGCGAAGGATCATCGTATCATCCAACGATGAGCCTTCATGTGGTCTCATGGGCAGTCCCCTTGGCTAG
dot-bracket secondary structure
(((((((.(..((((.(((((((..((((..((.(((((.(((((((........))))))).))))).)).)))).)))))))))))..)))))))).
SIMILARITIES| miRBase sbi-MIR169n: 0.0000003 PMRD sbi-miR169n: 0.0000003 microPC miR169: 0.00002 | UniProt no hits RFAM MIR169_5: 0.000005 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
