miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST045864
species: Eragrostis curvula
source: microPC, original name: miR169

Taxonomy by NCBI:
Eragrostis curvula Eragrostis Eragrostidinae Eragrostideae Chloridoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAGCCAATGATGACTTGCCT

miRNA*
 GCAGTCCCCTTGGCTAG

mismatches: 2
bulges: 2
View larger
pre-miRNA
 TAGCCAATGATGACTTGCCTGTGTCGACCTCCGCGAAGGATCATCGTATCATCCAACGATGAGCCTTCATGTGGTCTCATGGGCAGTCCCCTTGGCTAG

dot-bracket secondary structure
(((((((.(..((((.(((((((..((((..((.(((((.(((((((........))))))).))))).)).)))).)))))))))))..)))))))).


SIMILARITIES
miRBase sbi-MIR169n: 0.0000003

PMRD sbi-miR169n: 0.0000003

microPC miR169: 0.00002		UniProt no hits

RFAM MIR169_5: 0.000005

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;