miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST045872
species:
Brassica napus
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCACA
miRNA*
TGCTCACTGCTCTTTCTGTCA
mismatches:
2
bulges:
2
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCACA
CAAAAGTAATCTGCATATACTGCATTTGCTTCTCTTGCG
TGCTCACTGCTCTTTCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((.
(((((((((..((((.....)))).))))))...))).)
)))))))).))).))))))).
SIMILARITIES
miRBase
bna-MIR156a
:
9e-41
PMRD
bna-miR156a
:
9e-41
microPC
miR156
:
9e-41
UniProt
no hits
RFAM
mir-156: 2e-23
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record