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Species belonging to selected taxon:
Brassica napus
ABOUT THIS RECORD
ID:
MNEST045889
species:
Brassica napus
miRNA family:
MIR167
source:
microPC, original name:
miR167
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTA
miRNA*
GATCATGTTCGTAGTTTCA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TGAAGCTGCCAGCATGATCTA
GTTAACTTTATTTCTCCGTTGTTTATCCATGACAATGGAAAAGGGATAAGTGTCGATTA
GATCATGTTCGTAGTTTCA
dot-bracket secondary structure
.((((((((.(((((((((((
((..(((((((..((((((((((.......)))))))))...)..))))).))..))))
))))))))).)))))))).
SIMILARITIES
miRBase
bra-MIR167a
:
2e-51
PMRD
bra-miR167a
:
2e-51
microPC
miR167
:
5e-49
UniProt
no hits
RFAM
MIR167_1: 4e-50
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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