miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Picea abies, Picea engelmannii x Picea glauca, Picea glauca, Picea sitchensis



ABOUT THIS RECORD

ID: MNEST045973
species: Picea glauca
source: microPC, original name: miR482

Taxonomy by NCBI:
Picea glauca Picea Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTACTCCTCCCATTCC

miRNA*
 AGTGGAAGGATAGGGT

mismatches: 1
bulges: 1
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pre-miRNA
 GGAGTGGAAGGATAGGGTAAGACTGCGGTTAAGTGAGGCTGCTTCAATAATTATTTGCTCTAATCTCACCAGTCTTCCCTACTCCTCCCATTCC

dot-bracket secondary structure
(((((((.(((((((((.(((((((.......(((((..((...(((.......)))...))..))))))))))))))))).)))).)))))))


SIMILARITIES
miRBase pab-MIR482a: 1e-43

PMRD pta-miR482c: 0.00000007

microPC miR482: 5e-46		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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