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Species belonging to selected taxon:
Cichorium intybus
,
Cichorium endivia
ABOUT THIS RECORD
ID:
MNEST046013
species:
Cichorium endivia
source:
microPC, original name:
miR393
Taxonomy by NCBI:
Cichorium endivia
Cichorium
Cichoriinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCAAAGGGATCGCATTGATCC
miRNA*
ATCATGCGATCTCTTTGGA
mismatches:
0
bulges:
1
View larger
pre-miRNA
TCCAAAGGGATCGCATTGATCC
GGTTTATCAATCGATTCGAGTTTGATTCATTCATCTATCATATCCATGGAAGCAGCTGCAAATTTTTTTATCCAATTT
GATAATTTGG
ATCATGCGATCTCTTTGGA
dot-bracket secondary structure
((((((((((((((((.(((((
((.(((((((..(((..(((((((.........(((((.......)))))........)))))))....)))....))
))))).))))
)))))))))))))))))))
SIMILARITIES
miRBase
sbi-MIR393
:
0.000006
PMRD
sbi-miR393
:
0.000006
microPC
miR393
:
1e-56
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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