ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR159
source: microPC, original name: miR159
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATTGGAGTGAAGGGAGCTCCA miRNA* GAGTTCCCTGCACTCCAAGTC mismatches: 3 bulges: 0 |
pre-miRNA
TGGAGTTCCCTGCACTCCAAGTCTGAAAGGATATGATGGTAAACCTCTACTGCTAGTTCATGGATACCTCTGACTTCTTAACAACATGCGTTCGAAGTCA
AGGGTTTGCATGCCCTGGGAGATGAGTTTACCTTGATCTTTTGGTATTGGAGTGAAGGGAGCTCCA
dot-bracket secondary structure
.((((((((((.((((((((..(..(((((.((....(((((((.((..((.((((..((((.(.(((..(((((((..(((.......))).)))))))
..))).).))))..)))).))..))))))))).)).)))))..)..)))))))).)))))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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TGGAGTTCCCTGCACTCCAAGTCTGAAAGGATATGATGGTAAACCTCTACTGCTAGTTCATGGATACCTCTGACTTCTTAACAACATGCGTTCGAAGTCA
AGGGTTTGCATGCCCTGGGAGATGAGTTTACCTTGATCTTTTGGTATTGGAGTGAAGGGAGCTCCA
dot-bracket secondary structure
.((((((((((.((((((((..(..(((((.((....(((((((.((..((.((((..((((.(.(((..(((((((..(((.......))).)))))))
..))).).))))..)))).))..))))))))).)).)))))..)..)))))))).)))))))))).
SIMILARITIES| miRBase gma-MIR159b: 4e-91 PMRD gma-miR159b: 4e-91 microPC miR159: 4e-91 | UniProt no hits RFAM MIR159: 0.00000001 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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