ABOUT THIS RECORDspecies: Papaver somniferum
source: microPC, original name: miR1533
Taxonomy by NCBI:
Papaver somniferum Papaver Papaveraceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAATAATAATAATAAT miRNA* TATTTTATTATTATTT mismatches: 1 bulges: 1 |
pre-miRNA
TTATTTTATTATTATTTGATGATTTGTGCAAAAATACCATGAAATCAAGAAGTTTTTTCATGAAATTAGAGAAATAATAATAATAATAAT
dot-bracket secondary structure
(((((((((((((((((..(((((((((.((((((..(.((....)).)..)))))).))).))))))...)))))))))))).))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TTATTTTATTATTATTTGATGATTTGTGCAAAAATACCATGAAATCAAGAAGTTTTTTCATGAAATTAGAGAAATAATAATAATAATAAT
dot-bracket secondary structure
(((((((((((((((((..(((((((((.((((((..(.((....)).)..)))))).))).))))))...)))))))))))).))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
