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Species belonging to selected taxon:
Brassica napus
,
Brassica oleracea var. alboglabra
,
Brassica rapa
,
Brassica oleracea
ABOUT THIS RECORD
ID:
MNEST046083
species:
Brassica napus
source:
microPC, original name:
miR167
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCT
miRNA*
ATCATCCTGCGGCTTCA
mismatches:
2
bulges:
1
View larger
pre-miRNA
TGAAGCTGCCAGCATGATCT
GATAGTGGTACCAG
ATCATCCTGCGGCTTCA
dot-bracket secondary structure
.((((((((.((.(((((((
(..........)))
))))).)))))))))).
SIMILARITIES
miRBase
ssp-MIR167b
:
0.00000003
PMRD
ssp-miR167
:
0.00000003
microPC
miR167
:
4e-23
UniProt
no hits
RFAM
MIR167_1: 0.00004
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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