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Species belonging to selected taxon:

Carthamus tinctorius, Centaurea maculosa, Centaurea solstitialis



ABOUT THIS RECORD

ID: MNEST046090
species: Centaurea solstitialis
miRNA family: MIR162
source: microPC, original name: miR162

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGATAAACCTCTGCATCCA

miRNA*
 GAGTCAGCGGTTTATCGATC

mismatches: 4
bulges: 0
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pre-miRNA
 TGGAGTCAGCGGTTTATCGATCAGTTCCTTTTAACAAACGCATGAACAAGAGAGAGCGAGCGTAAAAGAGGAATCGATCGATAAACCTCTGCATCCA

dot-bracket secondary structure
.(((..(((.((((((((((((.(((((((((.....((((.((..(......)..)).))))..))))))))).)))))))))))).)))..))).


SIMILARITIES
miRBase sbi-MIR162: 0.000000005

PMRD osa-miR162a: 0.000000005

microPC miR162: 3e-50		UniProt no hits

RFAM MIR162_2: 0.00000009

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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