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Species belonging to selected taxon:

Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST046168
species: Zea mays
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 AATGTTGTCTGGTTCAAGG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 GGAATGTTGTCTGGTTCAAGGTCTTGCTTTCCGATTTGAGGATGATCCATGCTTGCATGTGTAGTTTTTTTTGTTCCTCAGATCTACAAGATCTCGGACC
AGGCTTCATTCC

dot-bracket secondary structure
((((((..(((((((((.((((((((......((((((((((..(..((((....))))..)............))))))))))..)))))))).)))))
))))..))))))


SIMILARITIES
miRBase zma-MIR166b: 1e-43

PMRD zma-miR166b: 1e-43

microPC miR166: 9e-45		UniProt no hits

RFAM mir-166: 4e-41

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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