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Species belonging to selected taxon:
Citrus aurantium
,
Citrus reticulata
,
Citrus sinensis
,
Citrus unshiu
,
Citrus clementina
ABOUT THIS RECORD
ID:
MNEST046172
species:
Citrus sinensis
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Citrus sinensis
Citrus
Rutaceae
Sapindales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCCAAGAATGACTTGCCG
miRNA*
GCAGGCCATTCTTGTCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGCCAAGAATGACTTGCCG
ACGGCATTGACCATAATATCATACG
GCAGGCCATTCTTGTCT
dot-bracket secondary structure
((.((((((((.(((((((
..(..((((....))))..)...))
))))).)))))))).))
SIMILARITIES
miRBase
csi-MIR169
:
5e-29
PMRD
ptc-miR169t
:
0.0006
microPC
miR169
:
5e-29
UniProt
no hits
RFAM
MIR169_2: 0.0007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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