miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Glycine soja, Phaseolus acutifolius, Phaseolus coccineus, Cajanus cajan, Glycine max, Vigna unguiculata, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST046196
species: Glycine max
miRNA family: MIR169
source: microPC, original name: miR169

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCCAAGGATGACTTGCCGG

miRNA*
 GGCAAGTTGGCCTTGGCT

mismatches: 2
bulges: 0
View larger
pre-miRNA
 AGCCAAGGATGACTTGCCGGCATTAGCCAAGTGAATGAGCATCATATATATATATATATATATATATATATATATGACTCATGTTCTTGTCGGCAAGTTG
GCCTTGGCT

dot-bracket secondary structure
((((((((..((((((((((((..(((.......(((((..((((((((((((((((....))))))))))))))))))))))))..)))))))))))).
.))))))))


SIMILARITIES
miRBase zma-MIR169p: 0.0000003

PMRD gso-miR169g*: 6e-18

microPC miR169: 6e-18		UniProt no hits

RFAM MIR169_2: 0.000002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
deep sequencing data evidence




Liczniki na strone;