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Species belonging to selected taxon:

Manihot esculenta



ABOUT THIS RECORD

ID: MNEST046217
species: Manihot esculenta
source: microPC, original name: miR169

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GCCAAGGATGACTTGCCTGC

miRNA*
 AGGCAGTCTCCTTGGC

mismatches: 1
bulges: 2
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pre-miRNA
 GCCAAGGATGACTTGCCTGCAGCTTCACGCAGATTTTTCATCAATTTGCATGAAATAACGCGGCTAACTAAGGTTTTGAATATGTATGTGGTTTACAGGC
AGTCTCCTTGGC

dot-bracket secondary structure
((((((((.((((.(((((.((((.((..((....(((((((.....).))))))...((..(((......)))..))....))..)).))))..)))))
))))))))))))


SIMILARITIES
miRBase sly-MIR169b: 0.00008

PMRD sly-miR169b: 0.00008

microPC miR169: 4e-59		UniProt no hits

RFAM MIR169_5: 0.0001

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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