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Species belonging to selected taxon:
Glycine max
ABOUT THIS RECORD
ID:
MNEST046260
species:
Glycine max
miRNA family:
MIR159
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATTGGAGTGAAGGGAGCTCCG
miRNA*
GAGCTCTCTGCACTCCAGTGT
mismatches:
2
bulges:
0
View larger
pre-miRNA
TG
GAGCTCTCTGCACTCCAGTGT
TGAAGGAGGTGATGGTAAACCCTAGCTGCTAATTCATGGTTACCTTTGGCTTCCCATAAGGAAGCATGTGAAAGTCA
TGGGTTTACATGAATATGGAGACGGGGTTGCCTTGATCTTTTGGT
ATTGGAGTGAAGGGAGCTCCG
dot-bracket secondary structure
.(
(((((((((.((((((((((.
.((((((......(((((.((((..((.((((((((((...((((.((((((..((((.(....).)))).))))))
.))))...))))))).)))))..)))))))))....))))))..)
))))))))).)))))))))).
SIMILARITIES
miRBase
gma-MIR159c
:
9e-46
PMRD
gma-miR159c
:
9e-46
microPC
miR319
:
6e-90
UniProt
no hits
RFAM
MIR159: 0.000002
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
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