miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Manihot esculenta



ABOUT THIS RECORD

ID: MNEST046278
species: Manihot esculenta
source: microPC, original name: miR168

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGA

miRNA*
CCGCCTTGCATCAACTGA

mismatches: 2
bulges: 0

View larger
pre-miRNA
TCGCTTGGTGCAGGTCGGGAACTGATTAGCTTCGCTTGCATATGTACGTATATGTTTTCTCCTTATTATGCTAGATGGCAAGTCTTGATTGGTTGAGATC
GGACAGAAGCGAATTGGATCCCGCCTTGCATCAACTGA


dot-bracket secondary structure
(((.((((((((((.(((((.(..(((.(((((....(((((((....)))))))....(((......((((....)))).((((..(....)..)))).
)))..))))).)))..).))))).)))))))))).)))



SIMILARITIES
miRBase ptc-MIR168a: 0.0000000001

PMRD pts-miR168b: 0.0000000001

microPC miR168: 2e-74
UniProt no hits

RFAM MIR168: 0.000000002

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;