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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST046279
species: Populus x canadensis
source: microPC, original name: miR530

Taxonomy by NCBI:
Populus x canadensis Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCATTTGCACCTGCATCTT

miRNA*
 GGTGCAGGTGCAAGTGCA

mismatches: 1
bulges: 0
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pre-miRNA
 TGCATTTGCACCTGCATCTTTTGCGTTTGTTTTGTTTTTGACTCCACAAACAAAATCAAGTTCTGTCGATACAGTATGTGGGACAATTAGATATAGAGTG
TTAGATATGGAAACTAATAAGCTTAGTTGAGGTGCAGGTGCAAGTGCA

dot-bracket secondary structure
.(((((((((((((((((((..((.((((((((((((.((....)).)))))))).))))...((((..(((.....))).)))).........((..((
((((.........))))))..))..)).))))))))))))))))))).


SIMILARITIES
miRBase ptc-MIR530b: 2e-52

PMRD ptc-miRf11519-akr: 2e-52

microPC miR1030: 5e-78		UniProt no hits

RFAM MIR530: 4e-51

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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