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Species belonging to selected taxon:
Panicum virgatum
ABOUT THIS RECORD
ID:
MNEST046291
species:
Panicum virgatum
source:
microPC, original name:
miR160
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCCTGGCTCCCTGTATGCC
miRNA*
CGTGCGAGGAGCCAAGC
mismatches:
2
bulges:
0
View larger
pre-miRNA
GCCTGGCTCCCTGTATGCC
ACTCGCGTAGCTGCCAGCCAGCCCAGTCGAGCTCCCCCAGGATTAGCTGTGGGCGTGTACTACGTTGCTGGCTCTACTGCG
GATGG
CGTGCGAGGAGCCAAGC
dot-bracket secondary structure
((.(((((((.((((((((
(..(((((((..((((((.(((..(((...((.(((.(((......))).))).))..)))..))))))))).)))).)))
..)))
)))))).))))))).))
SIMILARITIES
miRBase
tae-MIR160
:
0.0000000000004
PMRD
tae-miR160
:
0.0000000000004
microPC
miR160
:
5e-65
UniProt
no hits
RFAM
mir-160: 0.000000000007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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